STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000030823DIOX_N domain-containing protein. (133 aa)    
Predicted Functional Partners:
aasdh
Carrier domain-containing protein.
     
 0.910
ulk3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.474
Stk35
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.474
ENSCMIP00000035149
Protein kinase domain-containing protein.
    
 
 0.474
ulk1
DUF3543 domain-containing protein.
    
 
 0.474
pdik1l
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.474
ulk2
Unc-51-like kinase 2.
    
 
 0.474
trit1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
      
 0.455
LOC103190656
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.447
ENSCMIP00000001257
Uncharacterized protein.
    
 0.421
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.