STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk10Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (360 aa)    
Predicted Functional Partners:
ccnc
Uncharacterized protein; Belongs to the cyclin family.
     
 0.636
ccnl1
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.556
ccnl2
Cyclin-L1-like protein; Belongs to the cyclin family.
   
 
 0.556
cep63
CEP63 domain-containing protein.
     
 0.540
haus8
Uncharacterized protein.
     
 0.534
mapre1
Uncharacterized protein.
   
 
  0.534
cep78
Uncharacterized protein.
     
 0.533
ywhae
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.528
tubg1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 
  0.504
csnk1e
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
     
 0.496
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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