STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000033504Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
psmb4
Proteasome subunit beta.
   
 0.891
LOC103174436
Uncharacterized protein.
   
 0.888
psma3
Proteasome subunit alpha type.
   
 0.879
psmb3
Proteasome subunit beta.
   
 0.876
psmb2
Proteasome subunit beta.
   
 0.873
psma5
Proteasome subunit alpha type.
   
 0.858
psma1
Proteasome endopeptidase complex.
   
 0.858
LOC103171909
Proteasome subunit alpha type.
   
 0.857
psma6
Proteasome endopeptidase complex.
   
 0.856
psma2
Proteasome endopeptidase complex.
   
 0.850
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.