STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191244Uncharacterized protein. (157 aa)    
Predicted Functional Partners:
fnta
Uncharacterized protein.
     
 0.975
LOC103175221
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.966
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.958
ENSCMIP00000010144
Uncharacterized protein.
 
     0.931
zmpste24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 
 0.760
churc1
Uncharacterized protein.
    
 0.683
usp42
USP domain-containing protein; Belongs to the peptidase C19 family.
     
 0.588
usp36
Ubiquitin carboxyl-terminal hydrolase.
     
 0.588
oma1
Peptidase_M48 domain-containing protein.
    
 
 0.586
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.503
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]