STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adat1A to I editase domain-containing protein. (509 aa)    
Predicted Functional Partners:
adat2
CMP/dCMP-type deaminase domain-containing protein.
      
 0.848
kars1
Lysine--tRNA ligase.
 
    
 0.623
apobec2
Putative C-to-U-editing enzyme APOBEC-2.
      
 0.601
apobec4
Uncharacterized protein.
      
 0.564
pnpt1
S1 motif domain-containing protein.
    
 
 0.557
ptpa
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
  
 0.554
ENSCMIP00000001870
Rap1_C domain-containing protein.
      
 0.451
qpct
Glutaminyl-peptide cyclotransferase.
   
  
 0.438
ippk
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
      
 0.420
pkdrej
Uncharacterized protein.
      
 0.408
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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