STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam149aDUF3719 domain-containing protein. (679 aa)    
Predicted Functional Partners:
gm2a
ML domain-containing protein.
    
 0.561
LOC103182985
ML domain-containing protein.
    
 0.561
amdhd2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
    
 0.538
LOC103182484
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.522
LOC103182487
Uncharacterized protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.522
ctbs
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.522
LOC103188896
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
    0.465
LOC103188894
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
    0.465
tbc1d32
Uncharacterized protein.
    
 
 0.457
gusb
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.425
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.