STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mvdDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (404 aa)    
Predicted Functional Partners:
LOC103183617
Nudix hydrolase domain-containing protein.
  
 
 0.997
mvk
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
 
 
 0.996
LOC103172715
Uncharacterized protein.
 
      0.893
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.867
ENSCMIP00000010120
Uncharacterized protein.
  
 0.866
sqle
Squalene monooxygenase.
   
  
 0.821
hao2
FMN hydroxy acid dehydrogenase domain-containing protein.
    
 0.818
hao1
Hydroxyacid oxidase 1-like protein.
    
 0.818
LOC103177796
FMN hydroxy acid dehydrogenase domain-containing protein.
    
 0.818
LOC103181227
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.790
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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