STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adgrd1Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (839 aa)    
Predicted Functional Partners:
ranbp2
Uncharacterized protein.
   
 0.982
ENSCMIP00000004712
RanBD1 domain-containing protein.
   
 0.978
ranbp1
RanBD1 domain-containing protein.
   
 0.940
rangap1
RanGAP1_C domain-containing protein.
   
 0.935
kpnb1
Importin N-terminal domain-containing protein.
   
 0.930
rcc1
Regulator of chromosome condensation.
   
 0.907
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.853
xpo5
Importin N-terminal domain-containing protein.
    
 0.834
Rpgr
Uncharacterized protein.
   
 0.834
xpo1
Exportin-1.
   
 0.816
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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