Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lsm1 | lsm3 | ENSCMIP00000022264 | ENSCMIP00000047836 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm domain-containing protein. | 0.983 |
| lsm1 | lsm4 | ENSCMIP00000022264 | ENSCMIP00000011709 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| lsm1 | lsm5 | ENSCMIP00000022264 | ENSCMIP00000035198 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| lsm1 | lsm6 | ENSCMIP00000022264 | ENSCMIP00000019239 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm6. | 0.999 |
| lsm1 | lsm7 | ENSCMIP00000022264 | ENSCMIP00000000878 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm domain-containing protein. | 0.999 |
| lsm1 | lsm8 | ENSCMIP00000022264 | ENSCMIP00000024709 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.982 |
| lsm1 | sart3 | ENSCMIP00000022264 | ENSCMIP00000028433 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.553 |
| lsm1 | snrpe | ENSCMIP00000022264 | ENSCMIP00000037778 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.816 |
| lsm1 | snrpf | ENSCMIP00000022264 | ENSCMIP00000035707 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm domain-containing protein. | 0.774 |
| lsm3 | lsm1 | ENSCMIP00000047836 | ENSCMIP00000022264 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.983 |
| lsm3 | lsm4 | ENSCMIP00000047836 | ENSCMIP00000011709 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
| lsm3 | lsm5 | ENSCMIP00000047836 | ENSCMIP00000035198 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| lsm3 | lsm6 | ENSCMIP00000047836 | ENSCMIP00000019239 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm6. | 0.999 |
| lsm3 | lsm7 | ENSCMIP00000047836 | ENSCMIP00000000878 | Sm domain-containing protein. | Sm domain-containing protein. | 0.998 |
| lsm3 | lsm8 | ENSCMIP00000047836 | ENSCMIP00000024709 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.998 |
| lsm3 | sart3 | ENSCMIP00000047836 | ENSCMIP00000028433 | Sm domain-containing protein. | Uncharacterized protein. | 0.909 |
| lsm3 | snrnp200 | ENSCMIP00000047836 | ENSCMIP00000022410 | Sm domain-containing protein. | Uncharacterized protein. | 0.901 |
| lsm3 | snrpe | ENSCMIP00000047836 | ENSCMIP00000037778 | Sm domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.997 |
| lsm3 | snrpf | ENSCMIP00000047836 | ENSCMIP00000035707 | Sm domain-containing protein. | Sm domain-containing protein. | 0.965 |
| lsm4 | lsm1 | ENSCMIP00000011709 | ENSCMIP00000022264 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.999 |
page 1 of 6