STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntn4Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
LOC103190727
Uncharacterized protein.
 
   
 
0.904
ENSCMIP00000038828
Uncharacterized protein.
 
  
0.789
unc5a
Uncharacterized protein.
     
 0.732
unc5c
Uncharacterized protein.
     
 0.654
neo1
Uncharacterized protein.
   
 0.648
dcc
Uncharacterized protein.
   
 0.648
igdcc4
Uncharacterized protein.
   
 0.599
unc5d
Uncharacterized protein.
     
 0.593
ENSCMIP00000008020
Uncharacterized protein.
 
  
 0.480
birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
  0.454
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.