STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctex1d1Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
dynlrb2
Dynein light chain roadblock.
   
 0.790
ENSCMIP00000029716
Uncharacterized protein.
   
 0.714
dynll1
Dynein light chain.
    
 0.706
dynll2
Dynein light chain.
    
 0.706
dync2li1
Uncharacterized protein.
   
 0.695
dynlrb1
Dynein light chain roadblock.
   
 0.681
dnal4
Dynein light chain.
    
 0.681
wdr60
Uncharacterized protein.
    
 0.672
wdr78
WD_REPEATS_REGION domain-containing protein.
    
 0.650
dynlt3
Uncharacterized protein.
    
 
 0.637
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.