STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ca7Carbonic anhydrase 7-like protein; Belongs to the alpha-carbonic anhydrase family. (271 aa)    
Predicted Functional Partners:
rpf2
Brix domain-containing protein.
   
 
 0.624
ccar1
SAP domain-containing protein.
      
 0.615
LOC103184961
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
  
0.605
brd7
Bromo domain-containing protein.
   
  
 0.553
heatr3
Uncharacterized protein.
 
    
 0.548
Rrs1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.532
grwd1
WD_REPEATS_REGION domain-containing protein.
   
  
 0.500
LOC103171726
Ribosomal_L18_c domain-containing protein.
    
 
 0.476
Rpl5
Ribosomal_L18_c domain-containing protein.
    
 
 0.476
ENSCMIP00000007611
Uncharacterized protein.
   
  
 0.436
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.