Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC103179261 | Ubc | ENSCMIP00000016534 | ENSCMIP00000028897 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Ubiquitin-like domain-containing protein. | 0.429 |
| LOC103179261 | atg12 | ENSCMIP00000016534 | ENSCMIP00000001695 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.819 |
| LOC103179261 | atg3 | ENSCMIP00000016534 | ENSCMIP00000027669 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Autophagy-related protein 3. | 0.916 |
| LOC103179261 | atg4b | ENSCMIP00000016534 | ENSCMIP00000032757 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.819 |
| LOC103179261 | atg5 | ENSCMIP00000016534 | ENSCMIP00000017644 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.800 |
| LOC103179261 | atg7 | ENSCMIP00000016534 | ENSCMIP00000009203 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] | 0.907 |
| LOC103179261 | map1lc3a | ENSCMIP00000016534 | ENSCMIP00000026156 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Uncharacterized protein. | 0.946 |
| LOC103179261 | map1lc3b | ENSCMIP00000016534 | ENSCMIP00000036315 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Uncharacterized protein. | 0.947 |
| LOC103179261 | nbr1 | ENSCMIP00000016534 | ENSCMIP00000003997 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | ZZ-type domain-containing protein. | 0.999 |
| LOC103179261 | sqstm1 | ENSCMIP00000016534 | ENSCMIP00000013654 | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | Uncharacterized protein. | 0.821 |
| Ubc | LOC103179261 | ENSCMIP00000028897 | ENSCMIP00000016534 | Ubiquitin-like domain-containing protein. | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | 0.429 |
| Ubc | atg12 | ENSCMIP00000028897 | ENSCMIP00000001695 | Ubiquitin-like domain-containing protein. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.563 |
| Ubc | atg5 | ENSCMIP00000028897 | ENSCMIP00000017644 | Ubiquitin-like domain-containing protein. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.412 |
| Ubc | atg7 | ENSCMIP00000028897 | ENSCMIP00000009203 | Ubiquitin-like domain-containing protein. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] | 0.836 |
| Ubc | map1lc3a | ENSCMIP00000028897 | ENSCMIP00000026156 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.815 |
| Ubc | map1lc3b | ENSCMIP00000028897 | ENSCMIP00000036315 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.864 |
| Ubc | nbr1 | ENSCMIP00000028897 | ENSCMIP00000003997 | Ubiquitin-like domain-containing protein. | ZZ-type domain-containing protein. | 0.945 |
| Ubc | sqstm1 | ENSCMIP00000028897 | ENSCMIP00000013654 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.980 |
| atg12 | LOC103179261 | ENSCMIP00000001695 | ENSCMIP00000016534 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Microtubule-associated proteins 1A/1B light chain 3C-like protein. | 0.819 |
| atg12 | Ubc | ENSCMIP00000001695 | ENSCMIP00000028897 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Ubiquitin-like domain-containing protein. | 0.563 |
page 1 of 6