STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmabCorrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (348 aa)    
Predicted Functional Partners:
iyd
Nitroreductase domain-containing protein.
    
 0.864
eprs1
Uncharacterized protein.
     
 0.667
mmaa
Uncharacterized protein.
      
 0.657
mmut
B12-binding domain-containing protein.
      
 0.653
mmadhc
Uncharacterized protein.
      
 0.647
mmachc
Methylmalonic aciduria and homocystinuria type C protein-like protein.
     
 0.646
Mcee
VOC domain-containing protein.
     
 0.614
lmbrd1
Uncharacterized protein.
      
 0.599
ppcdc
Phosphopantothenoylcysteine decarboxylase-like protein.
     
 0.596
acsf3
Uncharacterized protein.
      
 0.593
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.