STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000037728Uncharacterized protein. (897 aa)    
Predicted Functional Partners:
ENSCMIP00000037716
Uncharacterized protein.
 
    
0.908
actn2
Uncharacterized protein.
 
  
  0.902
LOC103190613
Uncharacterized protein.
 
  
  0.902
actn1
Uncharacterized protein.
 
  
  0.900
sptan1
Uncharacterized protein.
  
0.821
itsn2
Uncharacterized protein.
     
 0.614
LOC103189761
Uncharacterized protein.
 
  
  0.562
itsn1
Uncharacterized protein.
     
 0.466
ankyrin-1
Uncharacterized protein.
   
 0.415
LOC103174373
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
   
 0.415
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.