STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptk6Tyrosine-protein kinase. (491 aa)    
Predicted Functional Partners:
matk
Tyrosine-protein kinase.
  
0.659
csk
Tyrosine-protein kinase.
  
0.657
pag1
Uncharacterized protein.
    
 0.646
ENSCMIP00000043212
Sema domain-containing protein.
 
  
 0.634
grb2
Uncharacterized protein.
    
0.626
nedd9
SH3 domain-containing protein.
   
 0.613
bcar1
SH3 domain-containing protein.
   
 0.613
stap2
Uncharacterized protein.
   
 0.603
LOC103191373
Uncharacterized protein.
    
 0.603
cbl
Cbl-PTB domain-containing protein.
    
 0.603
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.