STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000038969Sushi domain-containing protein. (139 aa)    
Predicted Functional Partners:
Csmd1
Uncharacterized protein.
 
      0.900
ENSCMIP00000039014
Uncharacterized protein.
 
      0.900
ENSCMIP00000038971
Uncharacterized protein.
 
      0.899
ENSCMIP00000038976
Uncharacterized protein.
 
      0.899
ENSCMIP00000038981
Uncharacterized protein.
 
      0.899
ENSCMIP00000038963
Uncharacterized protein.
 
      0.898
ENSCMIP00000039050
Uncharacterized protein.
 
      0.898
ENSCMIP00000038984
Uncharacterized protein.
 
      0.765
LOC103182516
Uncharacterized protein.
 
  
  0.515
ENSCMIP00000014202
Uncharacterized protein.
  
     0.439
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.