STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tor3aTorsin-3A-like protein. (363 aa)    
Predicted Functional Partners:
ENSCMIP00000010117
Uncharacterized protein.
    
 
 0.617
mrps18a
Mitochondrial ribosomal protein S18A.
      
 0.553
rft1
Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family.
      
 0.553
cops4
PCI domain-containing protein.
   
  0.519
ston2
Uncharacterized protein; Belongs to the Stoned B family.
    
  0.511
cops2
PCI domain-containing protein.
   
 
  0.497
cops8
COP9 signalosome complex subunit 8.
   
 
  0.481
LOC103184795
Uncharacterized protein.
   
 
 0.477
ENSCMIP00000010119
Uncharacterized protein.
   
 
 0.477
nphs2
PHB domain-containing protein.
      
 0.459
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.