STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps52Uncharacterized protein. (684 aa)    
Predicted Functional Partners:
vps54
Uncharacterized protein.
    
 0.998
vps53
Vps53_N domain-containing protein.
   
 0.995
vps51
Uncharacterized protein.
   
 0.994
vps50
Uncharacterized protein.
   
 
 0.933
stx6
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.869
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.867
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.864
cog3
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.862
stx16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.861
cog2
Conserved oligomeric Golgi complex subunit 2.
   
 
 0.838
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.