ENSCMIP00000040002 protein (Callorhinchus milii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCMIP00000040002

Uncharacterized protein. (235 aa)

Predicted Functional Partners:

ENSCMIP00000040038

0.910

ENSCMIP00000034157

0.900

ENSCMIP00000040022

0.893

ENSCMIP00000018668

0.499

ENSCMIP00000045678

0.494

ENSCMIP00000000512

0.492

ENSCMIP00000035509

0.476

ENSCMIP00000020116

0.465

ENSCMIP00000026037

0.409

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSCMIP00000000512	ENSCMIP00000026037	annotation not available	Uncharacterized protein.	0.508
ENSCMIP00000000512	ENSCMIP00000040002	annotation not available	Uncharacterized protein.	0.492
ENSCMIP00000018668	ENSCMIP00000026037	annotation not available	Uncharacterized protein.	0.505
ENSCMIP00000018668	ENSCMIP00000040002	annotation not available	Uncharacterized protein.	0.499
ENSCMIP00000018668	ENSCMIP00000045678	annotation not available	Uncharacterized protein.	0.527
ENSCMIP00000020116	ENSCMIP00000026037	annotation not available	Uncharacterized protein.	0.521
ENSCMIP00000020116	ENSCMIP00000040002	annotation not available	Uncharacterized protein.	0.465
ENSCMIP00000020116	ENSCMIP00000045678	annotation not available	Uncharacterized protein.	0.535
ENSCMIP00000026037	ENSCMIP00000000512	Uncharacterized protein.	annotation not available	0.508
ENSCMIP00000026037	ENSCMIP00000018668	Uncharacterized protein.	annotation not available	0.505
ENSCMIP00000026037	ENSCMIP00000020116	Uncharacterized protein.	annotation not available	0.521
ENSCMIP00000026037	ENSCMIP00000035509	Uncharacterized protein.	annotation not available	0.511
ENSCMIP00000026037	ENSCMIP00000040002	Uncharacterized protein.	Uncharacterized protein.	0.409
ENSCMIP00000026037	ENSCMIP00000040038	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.477
ENSCMIP00000026037	ENSCMIP00000045678	Uncharacterized protein.	Uncharacterized protein.	0.518
ENSCMIP00000034157	ENSCMIP00000040002	VWFA domain-containing protein.	Uncharacterized protein.	0.900
ENSCMIP00000035509	ENSCMIP00000026037	annotation not available	Uncharacterized protein.	0.511
ENSCMIP00000035509	ENSCMIP00000040002	annotation not available	Uncharacterized protein.	0.476
ENSCMIP00000035509	ENSCMIP00000045678	annotation not available	Uncharacterized protein.	0.535
ENSCMIP00000040002	ENSCMIP00000000512	Uncharacterized protein.	annotation not available	0.492