STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahsa1Aha1_N domain-containing protein. (345 aa)    
Predicted Functional Partners:
stip1
Uncharacterized protein.
   
 
 0.982
ENSCMIP00000035187
CS domain-containing protein.
   
 
 0.888
hsp90b1
Endoplasmin-like protein.
   
 
 0.876
ENSCMIP00000019628
Uncharacterized protein.
   
 
 0.841
Nktr
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.841
ppid
Uncharacterized protein.
   
 
 0.841
ppig
PPIase cyclophilin-type domain-containing protein.
   
 
 0.841
ENSCMIP00000030931
Uncharacterized protein.
   
 
 0.840
hsp90aa1
HATPase_c domain-containing protein.
   
 
 0.840
hsp90ab1
HATPase_c domain-containing protein.
   
 
 0.840
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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