STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mettl11bUncharacterized protein. (283 aa)    
Predicted Functional Partners:
kifap3
Uncharacterized protein.
      
 0.821
slc25a24
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.711
tbx4
Uncharacterized protein.
      
 0.641
gamt
RMT2 domain-containing protein.
   
 
 0.593
suox
Cytochrome b5 heme-binding domain-containing protein.
      
 0.552
mrto4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.481
tbx5
Uncharacterized protein.
      
 0.453
mettl18
MTS domain-containing protein.
   
  
 0.447
mettl27
Methyltransf_25 domain-containing protein.
   
 
 0.442
hemk1
Uncharacterized protein.
      
 0.424
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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