STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc18b1MFS domain-containing protein. (463 aa)    
Predicted Functional Partners:
rims2
Uncharacterized protein.
     
 0.968
cask
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
     
 0.765
mpp1
Uncharacterized protein; Belongs to the MAGUK family.
     
 0.672
PANX
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.553
PANX-2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.553
LOC103180805
Uncharacterized protein.
      
 0.552
slc10a4
Uncharacterized protein.
      
 0.551
ctcf
Uncharacterized protein.
      
 0.549
ston2
Uncharacterized protein; Belongs to the Stoned B family.
     
 0.532
rab3a
Uncharacterized protein.
     
 0.505
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.