STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab23Ras-related protein Rab-23-like protein. (233 aa)    
Predicted Functional Partners:
ENSCMIP00000004945
Uncharacterized protein.
     
 0.645
cplane2
Uncharacterized protein.
    
 0.641
chm
Uncharacterized protein.
   
 
 0.640
smo
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 
 0.587
ptar1
Uncharacterized protein.
     
 0.564
sufu
Suppressor of fused homolog.
      
 0.553
arl3
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.481
ENSCMIP00000048526
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.481
LOC103174351
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
      
 0.463
Rab2a
Ras-related protein Rab-2A.
  
 
0.460
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.