STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift172Uncharacterized protein. (1765 aa)    
Predicted Functional Partners:
ift57
Uncharacterized protein.
   
 0.994
ift80
WD_REPEATS_REGION domain-containing protein.
   
0.993
ift81
IFT81_CH domain-containing protein.
    
 0.990
traf3ip1
Uncharacterized protein.
    
 0.989
ift88
Uncharacterized protein.
   
 0.989
cluap1
Clusterin-associated protein 1-like protein.
    
 0.988
LOC103178839
Tetratricopeptide repeat protein 30A.
   
 0.988
ift52
Intraflagellar transport protein 52-like protein.
    
 0.981
ift46
Uncharacterized protein.
   
 0.981
ttc26
Uncharacterized protein.
    
 0.979
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.