STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V9KWH4_CALMIZinc finger protein 76. (264 aa)    
Predicted Functional Partners:
ENSCMIP00000041769
Uncharacterized protein.
 
    
0.908
Znf76
Uncharacterized protein.
 
      0.900
sp1
Uncharacterized protein.
    
 
0.556
gtf2a2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
     
 0.530
ezh2
Uncharacterized protein.
   
 0.515
taf11
TAFII28 domain-containing protein.
    
 0.495
pou2f1
POU domain protein.
    
  0.477
pou2f3
POU domain protein.
    
  0.477
LOC103177871
Transcription initiation factor TFIID subunit 9.
    
 0.476
gtf2b
TFIIB-type domain-containing protein.
   
 0.463
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.