STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wt1Wilms tumor 1. (399 aa)    
Predicted Functional Partners:
wtap
Uncharacterized protein.
    
 
 0.739
map3k1
Uncharacterized protein.
    
 
 0.714
amh
TGF_BETA_2 domain-containing protein.
      
 0.672
Sox9
Uncharacterized protein.
    
 0.640
nphs2
PHB domain-containing protein.
    
 0.600
Msln
Uncharacterized protein.
   
 
 0.589
pawr
Uncharacterized protein.
    
 
 0.576
tcf21
Transcription factor 21-like protein.
   
 
 0.574
LOC103171949
Nuclear receptor domain-containing protein.
    
 0.537
ENSCMIP00000004326
Nuclear receptor domain-containing protein.
    
 0.537
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.