STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103178449GbX1; Belongs to the globin family. (193 aa)    
Predicted Functional Partners:
LOC103188431
Uncharacterized protein.
   
 0.686
ENSCMIP00000043260
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 0.686
adgb
Androglobin; Belongs to the peptidase C2 family.
   
 
 0.660
LOC103172290
Cytoglobin; Belongs to the globin family.
      
0.657
LOC103191115
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
0.648
papln
Uncharacterized protein.
     
 0.570
edn1
Uncharacterized protein.
      
 0.553
LOC103179532
Uncharacterized protein.
      
 0.553
Edn3
END domain-containing protein.
      
 0.549
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
   
  
 0.477
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.