fchsd2 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

fchsd2

Uncharacterized protein. (759 aa)

Predicted Functional Partners:

itsn2

0.833

itsn1

0.719

snx16

0.635

wasl

0.627

ENSCMIP00000049024

0.627

gas7

0.624

LOC103185249

0.588

snx1

0.586

ubox5

0.553

lonp2

0.553

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000049024	fchsd2	ENSCMIP00000049024	ENSCMIP00000043929	CRIB domain-containing protein.	Uncharacterized protein.	0.627
ENSCMIP00000049024	gas7	ENSCMIP00000049024	ENSCMIP00000007040	CRIB domain-containing protein.	Uncharacterized protein.	0.775
ENSCMIP00000049024	itsn1	ENSCMIP00000049024	ENSCMIP00000038775	CRIB domain-containing protein.	Uncharacterized protein.	0.981
ENSCMIP00000049024	itsn2	ENSCMIP00000049024	ENSCMIP00000024182	CRIB domain-containing protein.	Uncharacterized protein.	0.989
LOC103185249	fchsd2	ENSCMIP00000046439	ENSCMIP00000043929	Uncharacterized protein.	Uncharacterized protein.	0.588
fchsd2	ENSCMIP00000049024	ENSCMIP00000043929	ENSCMIP00000049024	Uncharacterized protein.	CRIB domain-containing protein.	0.627
fchsd2	LOC103185249	ENSCMIP00000043929	ENSCMIP00000046439	Uncharacterized protein.	Uncharacterized protein.	0.588
fchsd2	gas7	ENSCMIP00000043929	ENSCMIP00000007040	Uncharacterized protein.	Uncharacterized protein.	0.624
fchsd2	itsn1	ENSCMIP00000043929	ENSCMIP00000038775	Uncharacterized protein.	Uncharacterized protein.	0.719
fchsd2	itsn2	ENSCMIP00000043929	ENSCMIP00000024182	Uncharacterized protein.	Uncharacterized protein.	0.833
fchsd2	lonp2	ENSCMIP00000043929	ENSCMIP00000040490	Uncharacterized protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.553
fchsd2	snx1	ENSCMIP00000043929	ENSCMIP00000023551	Uncharacterized protein.	PX domain-containing protein.	0.586
fchsd2	snx16	ENSCMIP00000043929	ENSCMIP00000002274	Uncharacterized protein.	PX domain-containing protein.	0.635
fchsd2	ubox5	ENSCMIP00000043929	ENSCMIP00000027249	Uncharacterized protein.	Uncharacterized protein.	0.553
fchsd2	wasl	ENSCMIP00000043929	ENSCMIP00000048597	Uncharacterized protein.	Uncharacterized protein.	0.627
gas7	ENSCMIP00000049024	ENSCMIP00000007040	ENSCMIP00000049024	Uncharacterized protein.	CRIB domain-containing protein.	0.775
gas7	fchsd2	ENSCMIP00000007040	ENSCMIP00000043929	Uncharacterized protein.	Uncharacterized protein.	0.624
gas7	itsn1	ENSCMIP00000007040	ENSCMIP00000038775	Uncharacterized protein.	Uncharacterized protein.	0.989
gas7	itsn2	ENSCMIP00000007040	ENSCMIP00000024182	Uncharacterized protein.	Uncharacterized protein.	0.997
gas7	wasl	ENSCMIP00000007040	ENSCMIP00000048597	Uncharacterized protein.	Uncharacterized protein.	0.775