STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103183517Uncharacterized protein. (391 aa)    
Predicted Functional Partners:
mysm1
Uncharacterized protein.
   
 0.981
xpc
Uncharacterized protein.
   
 0.933
ngly1
PAW domain-containing protein.
    
 0.930
uba52
Ribosomal protein L40-like isoform 1.
   
 0.914
Psmd4
Uncharacterized protein.
   
 0.903
LOC103178064
UV excision repair protein RAD23-like protein B isoform 5.
  
  
 
0.902
nbr1
ZZ-type domain-containing protein.
   
 0.885
Ubc
Ubiquitin-like domain-containing protein.
    
 0.883
psmd2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 0.879
psmc1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.865
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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