gemin7 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gemin7

Uncharacterized protein. (127 aa)

Predicted Functional Partners:

ddx20

0.993

gemin8

0.991

gemin2

0.960

gemin4

0.944

strap

0.872

LOC103173685

0.838

LOC103188255

0.838

LOC103182025

0.824

LOC103182694

0.824

ENSCMIP00000016666

0.770

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000016666	LOC103173685	ENSCMIP00000016666	ENSCMIP00000003824	SPATA6 domain-containing protein.	Uncharacterized protein.	0.666
ENSCMIP00000016666	LOC103182025	ENSCMIP00000016666	ENSCMIP00000011281	SPATA6 domain-containing protein.	Uncharacterized protein.	0.865
ENSCMIP00000016666	LOC103182694	ENSCMIP00000016666	ENSCMIP00000017960	SPATA6 domain-containing protein.	Tudor domain-containing protein.	0.865
ENSCMIP00000016666	LOC103188255	ENSCMIP00000016666	ENSCMIP00000014954	SPATA6 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.666
ENSCMIP00000016666	ddx20	ENSCMIP00000016666	ENSCMIP00000033955	SPATA6 domain-containing protein.	Uncharacterized protein.	0.797
ENSCMIP00000016666	gemin4	ENSCMIP00000016666	ENSCMIP00000027508	SPATA6 domain-containing protein.	Uncharacterized protein.	0.794
ENSCMIP00000016666	gemin7	ENSCMIP00000016666	ENSCMIP00000044960	SPATA6 domain-containing protein.	Uncharacterized protein.	0.770
ENSCMIP00000016666	gemin8	ENSCMIP00000016666	ENSCMIP00000021974	SPATA6 domain-containing protein.	Uncharacterized protein.	0.749
ENSCMIP00000016666	strap	ENSCMIP00000016666	ENSCMIP00000027626	SPATA6 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.492
LOC103173685	ENSCMIP00000016666	ENSCMIP00000003824	ENSCMIP00000016666	Uncharacterized protein.	SPATA6 domain-containing protein.	0.666
LOC103173685	LOC103182025	ENSCMIP00000003824	ENSCMIP00000011281	Uncharacterized protein.	Uncharacterized protein.	0.754
LOC103173685	LOC103182694	ENSCMIP00000003824	ENSCMIP00000017960	Uncharacterized protein.	Tudor domain-containing protein.	0.754
LOC103173685	LOC103188255	ENSCMIP00000003824	ENSCMIP00000014954	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.599
LOC103173685	ddx20	ENSCMIP00000003824	ENSCMIP00000033955	Uncharacterized protein.	Uncharacterized protein.	0.915
LOC103173685	gemin2	ENSCMIP00000003824	ENSCMIP00000003062	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.853
LOC103173685	gemin4	ENSCMIP00000003824	ENSCMIP00000027508	Uncharacterized protein.	Uncharacterized protein.	0.881
LOC103173685	gemin7	ENSCMIP00000003824	ENSCMIP00000044960	Uncharacterized protein.	Uncharacterized protein.	0.838
LOC103173685	gemin8	ENSCMIP00000003824	ENSCMIP00000021974	Uncharacterized protein.	Uncharacterized protein.	0.850
LOC103173685	strap	ENSCMIP00000003824	ENSCMIP00000027626	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.566
LOC103182025	ENSCMIP00000016666	ENSCMIP00000011281	ENSCMIP00000016666	Uncharacterized protein.	SPATA6 domain-containing protein.	0.865