STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkx2-2Homeobox domain-containing protein. (344 aa)    
Predicted Functional Partners:
pax6
Uncharacterized protein.
    
 
 0.565
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
 0.560
chrd
Uncharacterized protein.
      
 0.553
Olig1
BHLH domain-containing protein.
   
 0.544
LOC103185666
BHLH domain-containing protein.
   
 0.544
Nkx6-1
Homeobox domain-containing protein.
   
  
0.537
vps13c
Uncharacterized protein.
      
 0.526
syt1
Uncharacterized protein.
      
 0.521
neurog3
BHLH domain-containing protein.
   
 0.518
Neurog1
BHLH domain-containing protein.
   
 0.518
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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