STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatmUncharacterized protein. (438 aa)    
Predicted Functional Partners:
gamt
RMT2 domain-containing protein.
   
 0.988
agxt
Serine--pyruvate aminotransferase.
     
 0.916
arg2
Arginase.
     
 0.913
shmt2
Serine hydroxymethyltransferase, mitochondrial-like protein.
  
 0.913
gnmt
Glycine N-methyltransferase.
     
 0.912
LOC103186924
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.909
aldh7a1
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.908
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.907
nos2
Nitric oxide synthase; Produces nitric oxide (NO).
   
 0.905
aldh16a1
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
   
 0.905
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.