STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a20Solute carrier family 25 (Carnitine/acylcarnitine translocase), member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)    
Predicted Functional Partners:
aph1b
Gamma-secretase subunit Aph-1b-like protein.
 
    
 0.844
LOC103191252
Carn_acyltransf domain-containing protein.
   
  
 0.702
aasdh
Carrier domain-containing protein.
   
  
 0.681
pnpla8
PNPLA domain-containing protein.
 
      0.668
crat
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.646
chat
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.644
Slc30a7
Uncharacterized protein.
 
    
 0.530
etfdh
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.493
acsf2
Uncharacterized protein.
    
 
 0.490
hsdl2
SCP2 domain-containing protein.
   
  
 0.451
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.