STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103176793VWFA domain-containing protein. (178 aa)    
Predicted Functional Partners:
ENSCMIP00000045668
Uncharacterized protein.
 
     0.911
ENSCMIP00000028759
Uncharacterized protein.
 
      0.899
ENSCMIP00000045680
Uncharacterized protein.
 
      0.852
ENSCMIP00000045685
Uncharacterized protein.
 
      0.843
ENSCMIP00000045689
Uncharacterized protein.
 
      0.753
ENSCMIP00000039319
annotation not available
 
   
  0.648
ENSCMIP00000001814
Uncharacterized protein.
 
      0.602
col9a2
Uncharacterized protein.
 
      0.562
ENSCMIP00000041032
Uncharacterized protein.
 
      0.539
ENSCMIP00000017287
Uncharacterized protein.
 
   
  0.483
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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