STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dazlRRM domain-containing protein. (314 aa)    
Predicted Functional Partners:
ENSCMIP00000041192
RRM domain-containing protein.
   
 0.716
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.648
ddx4
Putative ATP-dependent RNA helicase DDX4-like protein; Belongs to the DEAD box helicase family.
   
 0.604
ENSCMIP00000029898
Uncharacterized protein.
   
  
 0.602
LOC103184192
Uncharacterized protein.
   
 
 0.595
piwil2
Uncharacterized protein; Belongs to the argonaute family.
   
  
 0.593
fau
Ubiquitin-like domain-containing protein.
   
 0.588
ENSCMIP00000045111
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.573
piwil1
Uncharacterized protein; Belongs to the argonaute family.
   
  
 0.566
LOC103190117
Synaptonemal complex protein 3.
    
 
 0.561
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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