STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd55ANK_REP_REGION domain-containing protein. (673 aa)    
Predicted Functional Partners:
ift52
Intraflagellar transport protein 52-like protein.
    
 0.619
ift46
Uncharacterized protein.
    
 0.614
Fam84a
LRAT domain-containing protein.
      
 0.584
LOC103185167
Uncharacterized protein.
      
 0.561
ccdc138
Uncharacterized protein.
    
 
 0.559
LOC103178839
Tetratricopeptide repeat protein 30A.
    
 0.554
ift74
Uncharacterized protein.
    
 
 0.545
grpr
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.517
tmtc2
TPR_REGION domain-containing protein.
    
 0.507
clhc1
Clathrin heavy chain linker domain-containing protein 1.
    
 0.482
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.