STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo5cUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1648 aa)    
Predicted Functional Partners:
LOC103172457
FERM domain-containing protein.
 
  
 0.828
LOC103172260
FERM domain-containing protein.
 
  
 0.818
rab11b
Uncharacterized protein.
   
 0.792
Rab11a
Uncharacterized protein.
   
 0.792
rsl24d1
Ribosomal L24 domain-containing 1.
      
 0.740
LOC103190793
Uncharacterized protein.
   
 0.648
ENSCMIP00000045057
FIP-RBD domain-containing protein.
   
 0.648
exoc4
Sec8_exocyst domain-containing protein.
    
 0.622
calm2
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.568
ENSCMIP00000010084
Uncharacterized protein.
    
 0.568
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.