STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxf2Fork-head domain-containing protein. (318 aa)    
Predicted Functional Partners:
akap6
Uncharacterized protein.
      
 0.521
elmod1
ELMO domain-containing protein.
      
 0.520
nkx3-2
Homeobox domain-containing protein.
   
 
 0.490
bmp2
TGF_BETA_2 domain-containing protein.
     
 0.485
bmp4
TGF_BETA_2 domain-containing protein.
     
 0.485
srf
MADS-box domain-containing protein.
    
 
 0.481
wt1
Wilms tumor 1.
    
 0.455
gata6
Transcription factor GATA-6-like protein.
   
 0.448
LOC103185686
Uncharacterized protein.
   
 0.448
gata5
Uncharacterized protein.
   
 0.448
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (24%) [HD]