STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103180126ZP domain-containing protein. (410 aa)    
Predicted Functional Partners:
agr3
Uncharacterized protein.
      
 0.591
dynlrb2
Dynein light chain roadblock.
   
    0.535
ocm2
Uncharacterized protein; Belongs to the parvalbumin family.
  
   
 0.516
ENSCMIP00000029716
Uncharacterized protein.
   
    0.482
LOC103174760
Uncharacterized protein.
      
 0.476
LOC103171875
Uncharacterized protein.
  
     0.470
LOC103188412
GLOBIN domain-containing protein; Belongs to the globin family.
  
     0.454
LOC103188411
Hemoglobin subunit alpha; Belongs to the globin family.
  
     0.434
ENSCMIP00000013841
Uncharacterized protein.
  
     0.419
LOC103185998
Interferon induced transmembrane protein 3.
  
     0.416
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.