STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thoc3WD_REPEATS_REGION domain-containing protein. (314 aa)    
Predicted Functional Partners:
thoc2
Uncharacterized protein.
    
 0.999
Thoc7
Uncharacterized protein.
   
 0.998
thoc5
Uncharacterized protein.
    
 0.997
thoc1
Death domain-containing protein.
    
 0.997
ENSCMIP00000009308
WD_REPEATS_REGION domain-containing protein.
   
 0.989
ddx39a
Uncharacterized protein.
    
 0.948
alyref
RRM domain-containing protein.
   
 0.938
ENSCMIP00000028392
Uncharacterized protein.
    
 0.910
Zc3h13
C3H1-type domain-containing protein.
    
 0.910
sarnp
SAP domain-containing protein.
     
 0.860
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.