lsm11 protein (Callorhinchus milii) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

lsm11

Uncharacterized protein. (208 aa)

Predicted Functional Partners:

lsm10

0.974

snrpe

0.969

snrpd3

0.967

snrpf

0.966

snrpg

0.962

snrpd1

0.841

slbp

0.759

LOC103177274

0.759

naa38

0.699

LOC103181322

0.669

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103177274	LOC103181322	ENSCMIP00000047447	ENSCMIP00000001118	SLBP_RNA_bind domain-containing protein.	Ig-like domain-containing protein.	0.464
LOC103177274	lsm10	ENSCMIP00000047447	ENSCMIP00000031248	SLBP_RNA_bind domain-containing protein.	Sm domain-containing protein.	0.774
LOC103177274	lsm11	ENSCMIP00000047447	ENSCMIP00000048295	SLBP_RNA_bind domain-containing protein.	Uncharacterized protein.	0.759
LOC103177274	naa38	ENSCMIP00000047447	ENSCMIP00000001844	SLBP_RNA_bind domain-containing protein.	Sm domain-containing protein.	0.464
LOC103177274	snrpd1	ENSCMIP00000047447	ENSCMIP00000024695	SLBP_RNA_bind domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.677
LOC103177274	snrpd3	ENSCMIP00000047447	ENSCMIP00000030273	SLBP_RNA_bind domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.668
LOC103177274	snrpe	ENSCMIP00000047447	ENSCMIP00000037778	SLBP_RNA_bind domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.647
LOC103177274	snrpf	ENSCMIP00000047447	ENSCMIP00000035707	SLBP_RNA_bind domain-containing protein.	Sm domain-containing protein.	0.662
LOC103177274	snrpg	ENSCMIP00000047447	ENSCMIP00000013211	SLBP_RNA_bind domain-containing protein.	Small nuclear ribonucleoprotein G.	0.625
LOC103181322	LOC103177274	ENSCMIP00000001118	ENSCMIP00000047447	Ig-like domain-containing protein.	SLBP_RNA_bind domain-containing protein.	0.464
LOC103181322	lsm10	ENSCMIP00000001118	ENSCMIP00000031248	Ig-like domain-containing protein.	Sm domain-containing protein.	0.830
LOC103181322	lsm11	ENSCMIP00000001118	ENSCMIP00000048295	Ig-like domain-containing protein.	Uncharacterized protein.	0.669
LOC103181322	slbp	ENSCMIP00000001118	ENSCMIP00000023039	Ig-like domain-containing protein.	SLBP_RNA_bind domain-containing protein.	0.464
LOC103181322	snrpd1	ENSCMIP00000001118	ENSCMIP00000024695	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.830
LOC103181322	snrpd3	ENSCMIP00000001118	ENSCMIP00000030273	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.918
LOC103181322	snrpe	ENSCMIP00000001118	ENSCMIP00000037778	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.924
LOC103181322	snrpf	ENSCMIP00000001118	ENSCMIP00000035707	Ig-like domain-containing protein.	Sm domain-containing protein.	0.913
LOC103181322	snrpg	ENSCMIP00000001118	ENSCMIP00000013211	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein G.	0.902
lsm10	LOC103177274	ENSCMIP00000031248	ENSCMIP00000047447	Sm domain-containing protein.	SLBP_RNA_bind domain-containing protein.	0.774
lsm10	LOC103181322	ENSCMIP00000031248	ENSCMIP00000001118	Sm domain-containing protein.	Ig-like domain-containing protein.	0.830