STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etf1eRF1_1 domain-containing protein. (459 aa)    
Predicted Functional Partners:
abce1
Uncharacterized protein.
   
 
 0.997
fau
Ubiquitin-like domain-containing protein.
   
 0.992
smg1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.975
gspt1
Tr-type G domain-containing protein.
   
 0.912
n6amt1
MTS domain-containing protein.
    
 0.893
upf1
Uncharacterized protein.
   
 0.878
rpl12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 0.878
rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.871
rps23
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.864
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.
   
 0.860
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.