STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpne8Copine-8-like protein. (590 aa)    
Predicted Functional Partners:
zfc3h1
zf-C3H1 domain-containing protein.
      
 0.718
ush1c
Uncharacterized protein.
      
 0.709
tspan8
Tetraspanin.
      
 0.707
tbc1d15
Rab-GAP TBC domain-containing protein.
      
 0.679
nbea
Uncharacterized protein.
   
  
 0.665
znf536
Uncharacterized protein.
      
 0.614
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.572
rnaseh2b
Uncharacterized protein.
   
 
 0.539
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.494
vamp3
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.407
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.