STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XIS5CobW C-terminal domain-containing protein. (218 aa)    
Predicted Functional Partners:
A0A4P9XRJ2
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.866
A0A4P9XQE4
Uncharacterized protein.
  
  
 0.664
A0A4P9XWU9
40S ribosomal protein S29.
  
 
 0.639
A0A4P9XSI8
Uncharacterized protein.
  
 
 0.629
A0A4P9XRY1
Uncharacterized protein.
  
  
 0.598
A0A4P9XHE1
tRNA synthetases class I (C) catalytic domain-containing protein.
  
  
 0.448
A0A4P9XHY1
Proliferation-associated protein 2G4-like protein.
    
 
 0.430
A0A4P9XNT0
Putative proliferation-associated 2g4.
    
 
 0.430
A0A4P9XX23
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.430
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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