STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XKU7U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (472 aa)    
Predicted Functional Partners:
A0A4P9XIT5
Sas10 C-terminal domain-containing protein.
   
 0.999
A0A4P9XPT5
Nucleolar protein 14.
   
 0.996
A0A4P9XRP4
U3 small nucleolar RNA-associated protein 22.
   
 0.992
A0A4P9XSL2
Uncharacterized protein.
   
 
 0.991
A0A4P9XWM2
WD40-repeat-containing domain protein.
   
 
  0.991
A0A4P9XN66
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
 0.989
A0A4P9XNI8
rRNA-processing protein FCF1.
   
 
 0.986
A0A4P9XXN3
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
  0.986
A0A4P9XHC9
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
  0.985
A0A4P9XHX4
Quinon protein alcohol dehydrogenase-like superfamily.
   
 0.985
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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