Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A4P9XHD4 | A0A4P9XJE2 | A0A4P9XHD4 | A0A4P9XJE2 | RNA_pol_Rpb1_5 domain-containing protein. | BP28CT domain-containing protein. | 0.926 |
A0A4P9XHD4 | A0A4P9XME7 | A0A4P9XHD4 | A0A4P9XME7 | RNA_pol_Rpb1_5 domain-containing protein. | WD40 repeat-like protein. | 0.916 |
A0A4P9XHD4 | A0A4P9XNN8 | A0A4P9XHD4 | A0A4P9XNN8 | RNA_pol_Rpb1_5 domain-containing protein. | DNA polymerase phi-domain-containing protein. | 0.955 |
A0A4P9XHD4 | A0A4P9XQN7 | A0A4P9XHD4 | A0A4P9XQN7 | RNA_pol_Rpb1_5 domain-containing protein. | ATP-dependent RNA helicase DBP10. | 0.819 |
A0A4P9XHD4 | A0A4P9XRP4 | A0A4P9XHD4 | A0A4P9XRP4 | RNA_pol_Rpb1_5 domain-containing protein. | U3 small nucleolar RNA-associated protein 22. | 0.908 |
A0A4P9XHD4 | A0A4P9XSL2 | A0A4P9XHD4 | A0A4P9XSL2 | RNA_pol_Rpb1_5 domain-containing protein. | Uncharacterized protein. | 0.988 |
A0A4P9XHD4 | A0A4P9XU08 | A0A4P9XHD4 | A0A4P9XU08 | RNA_pol_Rpb1_5 domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.426 |
A0A4P9XHD4 | A0A4P9XVF5 | A0A4P9XHD4 | A0A4P9XVF5 | RNA_pol_Rpb1_5 domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
A0A4P9XHD4 | NAT10 | A0A4P9XHD4 | A0A4P9XWA7 | RNA_pol_Rpb1_5 domain-containing protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.958 |
A0A4P9XHD4 | NOP7 | A0A4P9XHD4 | A0A4P9XT05 | RNA_pol_Rpb1_5 domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.900 |
A0A4P9XJE2 | A0A4P9XHD4 | A0A4P9XJE2 | A0A4P9XHD4 | BP28CT domain-containing protein. | RNA_pol_Rpb1_5 domain-containing protein. | 0.926 |
A0A4P9XJE2 | A0A4P9XME7 | A0A4P9XJE2 | A0A4P9XME7 | BP28CT domain-containing protein. | WD40 repeat-like protein. | 0.999 |
A0A4P9XJE2 | A0A4P9XNN8 | A0A4P9XJE2 | A0A4P9XNN8 | BP28CT domain-containing protein. | DNA polymerase phi-domain-containing protein. | 0.962 |
A0A4P9XJE2 | A0A4P9XQN7 | A0A4P9XJE2 | A0A4P9XQN7 | BP28CT domain-containing protein. | ATP-dependent RNA helicase DBP10. | 0.890 |
A0A4P9XJE2 | A0A4P9XRP4 | A0A4P9XJE2 | A0A4P9XRP4 | BP28CT domain-containing protein. | U3 small nucleolar RNA-associated protein 22. | 0.999 |
A0A4P9XJE2 | A0A4P9XSL2 | A0A4P9XJE2 | A0A4P9XSL2 | BP28CT domain-containing protein. | Uncharacterized protein. | 0.999 |
A0A4P9XJE2 | A0A4P9XU08 | A0A4P9XJE2 | A0A4P9XU08 | BP28CT domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.994 |
A0A4P9XJE2 | A0A4P9XVF5 | A0A4P9XJE2 | A0A4P9XVF5 | BP28CT domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.920 |
A0A4P9XJE2 | NAT10 | A0A4P9XJE2 | A0A4P9XWA7 | BP28CT domain-containing protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.994 |
A0A4P9XJE2 | NOP7 | A0A4P9XJE2 | A0A4P9XT05 | BP28CT domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.775 |
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