STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XNP8Endonuclease/exonuclease/phosphatase. (871 aa)    
Predicted Functional Partners:
A0A4P9XWG5
CCR4-Not complex component, Not1-domain-containing protein.
    
 0.962
A0A4P9XMB8
RING/Ubox like zinc-binding domain-containing protein.
    
 0.961
A0A4P9XRG9
Cell differentiation family, Rcd1-like-domain-containing protein.
    
 0.961
A0A4P9XI40
Not1 N-terminal domain, CCR4-Not complex component-domain-containing protein.
    
 0.958
A0A4P9XNQ4
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 0.917
A0A4P9XRN5
NOT2_3_5 domain-containing protein.
    
 0.901
A0A4V1IWD1
CUE domain-containing protein.
    
 0.901
A0A4P9XSK4
RNA pol II accessory factor, Cdc73 family-domain-containing protein.
   
 
 0.882
A0A4P9XKD7
Topoisomerase II-associated protein PAT1-domain-containing protein.
    
 
 0.874
A0A4P9XVG6
RNA polymerase II-associated.
    
   0.873
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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