STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XSB0CID domain-containing protein. (338 aa)    
Predicted Functional Partners:
A0A4P9XFZ0
AAA domain-containing protein.
   
 
 0.921
A0A4P9XZ21
RRM domain-containing protein.
    
 
 0.909
A0A4V1IWA6
SEN1_N domain-containing protein.
   
 
 0.810
A0A4P9XQT9
Uncharacterized protein.
   
 
 0.758
A0A4P9XQX4
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.758
A0A4P9XXK1
mRNA cap guanine-N7 methyltransferase.
   
 
 0.749
A0A4P9XH33
RNA polymerase Rpb1, domain 1-domain-containing protein.
   
 
 0.710
A0A4P9XRE2
Nuclear cap-binding protein subunit 2.
   
 
 0.700
A0A4P9XQ35
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.589
A0A4P9XVK8
CID domain-containing protein.
   
 
 0.589
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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