STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XSY7Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (392 aa)    
Predicted Functional Partners:
A0A4P9XHV0
HBS1 N-terminus-domain-containing protein.
   
 
 0.987
A0A4P9XW82
G-protein complex beta subunit.
    
 
 0.933
A0A4V1IXH6
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.923
A0A4P9XUW3
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.917
A0A4P9XTG3
40S ribosomal protein S20.
    
 
 0.903
A0A4P9XJ69
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.901
A0A4P9XR38
40S ribosomal protein S17-like protein.
   
 
 0.901
A0A4P9XX52
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.900
A0A4P9XS93
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.896
A0A4P9XNY3
Plectin/S10 domain-containing protein.
    
 
 0.895
Your Current Organism:
Thamnocephalis sphaerospora
NCBI taxonomy Id: 78915
Other names: T. sphaerospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.